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syncing on multiple systems without file organizer

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Hi, I've got mendeley synced across at least 3 machines, including downloading pdfs b/c I like having the option of opening the pdf from Mendeley. However, this results in constant duplication of files every time Mendeley updates. I already have a filing system and do not want to use file organizer. Is there any way that I can change the sync settings to make it so that it replaces rather than duplicates files? Any suggestions appreciated

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